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321.

EMBOSS conversions of the programs in the phylip package

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This package is the adaptation of the PHYLIP package in which its programs can operate with the biological sequence formats and databases of the European Molecular Biology Open Software Suite (EMBOSS). The software packages adapted for EMBOSS are called EMBASSY.

323.

PHYLIP (the PHYLogeny Inference Package) is a package of programs for inferring phylogenies (evolutionary trees). Methods that are available in the package include parsimony, distance matrix, and likelihood methods, including bootstrapping and consensus trees. Data types that can be handled include molecular sequences, gene frequencies, restriction sites and fragments, distance matrices, and discrete characters.

324.

The EMBASSY PHYLIP programs all have the prefix "f" to distinguish them from the original programs and avoid namespace conflict.

325.

PDP-8 Engineering and Scientific Interpreter eXtended

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ESI-X was the first stored program scientific interpreter for the PDP-8. ESI was designed by Dave Waks on 8/3/66 and was vaguely based on RAND's JOSS. In 1967 Bob Supnik extended the program to support 8KW of memory, and this became the "ESI-extended" or ESI-X FOCAL was eventually the successor of ESI-X.

327.

A media-rich model, simulation construction kit and authoring tool

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This is the Squeak image developed for the OLPC project.

329.

Documentation for etoys

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Squeak Etoys was inspired by LOGO, PARC-Smalltalk, Hypercard, and starLOGO. It is a media-rich authoring environment with a simple powerful scripted object model for many kinds of objects created by end-users that runs on many platforms, and is free and open source. It includes 2D and 3D graphics, images, text, particles, pres-entations, web-pages, videos, sound and MIDI, etc. It includes the ability to share desktops with other Etoy users in real-time, so many forms of immersive mentoring and play can be done over the Internet.