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146.
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Here the recursive parallelism paradigm is applied to the linear space profile-profile alignment algorithm. This approach is more time efficient on computers with distributed memory architecture. Traditional approach that relies on precomputing the profile-profile score matrix has also been implemented. Results shown the latter is indeed more appropriate for shared memory multiprocessor computer.
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Description
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(no translation yet)
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Located in
Package: clustalw-mpi
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147.
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ClustalX is suggested for its support for local realignments, seaview is a versatile editor of alignments.
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Description
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(no translation yet)
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Located in
Package: clustalw-mpi
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148.
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The original ClustalW/ClustalX can be found at URL: http://www.clustal.org/download/pre-2/
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Description
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(no translation yet)
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Located in
Package: clustalw-mpi
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149.
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Multiple alignment of nucleic acid and protein sequences (graphical interface)
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Summary
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(no translation yet)
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Located in
Package: clustalx
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150.
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This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.
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Description
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(no translation yet)
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Located in
Package: clustalx
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151.
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The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.
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Description
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(no translation yet)
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Located in
Package: clustalx
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152.
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An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.
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Description
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(no translation yet)
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Located in
Package: clustalx
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153.
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connect to a console server
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Summary
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(no translation yet)
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Located in
Package: conserver-client
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154.
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This is client part of the conserver system.
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Description
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(no translation yet)
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Located in
Package: conserver-client
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155.
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connect multiple user to a serial console with logging
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Summary
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(no translation yet)
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Located in
Package: conserver-server
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