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GenomicsDB is built on top of a htslib fork and an internal array storage system for importing, querying and transforming variant data. Variant data is sparse by nature (sparse relative to the whole genome) and using sparse array data stores is a perfect fit for storing such data.
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Located in Package: libgenomicsdb0 Package: libgenomicsdb-jni Package: libgenomicsdb-dev Package: genomicsdb-tools
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